Basepair Support

Alignment workflow and Report page overview The alignment of each individual sample starts with fastq data, performs QC, aligns reads to the genome using ...

Differential expression analysis and Report page overview RNA-seq differential expression analysis using DESeq2 starts with the gene count matrix files pro...

Workflow and Report page overview The analysis of each sample starts with fastq data, performs QC, extracts barcodes and UMI's, aligns reads to the ge...

Workflow and Report page overview The analysis starts with the Seurat object for each sample produced by our single-cell RNA-seq analysis pipeline. After ...

Alignment workflow and Report page overview The alignment of each individual sample starts with fastq data, performs QC, aligns reads to the genome using ...

Peak calling workflow and Report page overview ATAC-seq peak calling using macs2 starts with the de-duplicated BAM file produced by our alignment and QC pi...

Alignment workflow and Report page overview The alignment of each individual sample starts with fastq data, performs QC, aligns reads to the genome using ...

Peak calling workflow and Report page overview ChIP-Seq peak calling using macs2 starts with the de-duplicated BAM file produced by our alignment and QC pi...

Alignment workflow and Report page overview The alignment of each individual sample starts with fastq data, performs QC, aligns reads to the genome using ...

Variant calling workflow and Report page overview Germline variant calling starts with the BAM file produced by our Alignment/QC pipeline, variants are cal...