Basepair Support

Alignment workflow and Report page overview The alignment of each individual sample starts with fastq data, performs QC, aligns reads to the genome using ...

Differential expression analysis and Report page overview Differential expression analysis using DESeq2 starts with the gene count matrix files produced by...

Alignment workflow and Report page overview The alignment of each individual sample starts with fastq data, performs QC, aligns reads to the genome using ...

Peak calling workflow and Report page overview ChIP-Seq peak calling using macs2 starts with the de-duplicated BAM file produced by our alignment and QC pi...

Alignment workflow and Report page overview The alignment of each individual sample starts with fastq data, performs QC, aligns reads to the genome using ...

Peak calling workflow and Report page overview ATAC-seq peak calling using macs2 starts with the de-duplicated BAM file produced by our alignment and QC pi...

Alignment workflow and Report page overview The alignment of each individual sample starts with fastq data, performs QC, aligns reads to the genome using ...

Variant calling workflow and Report page overview Germline variant calling starts with the BAM file produced by our Alignment/QC pipeline, variants are cal...

Variant calling workflow and Report page overview Somatic variant calling starts with the BAM files produced by our Alignment/QC pipeline, variants are cal...

CNV analysis and Report page overview This pipeline assess copy number variation throughout the genome using the BAM file(s) output by our Alignment/QC wor...