Basepair generates a heatmap automatically for you that includes both the treated and control samples.
In the heatmap above, the IP and input samples are plotted within the heatmap. When you run a peak calling analysis, it'll include all the samples in the analysis. So if you have three IP samples and three input, it'll have a heat map for all six of those samples.
Was this article helpful?
That’s Great!
Thank you for your feedback
Sorry! We couldn't be helpful
Thank you for your feedback
Feedback sent
We appreciate your effort and will try to fix the article